Provides a set of functions useful when evaluating the results of presence-absence models. Package includes functions for calculating threshold dependent measures such as confusion matrices, pcc, sensitivity, specificity, and Kappa, and produces plots of each measure as the threshold is varied. It will calculate optimal threshold choice according to a choice of optimization criteria. It also includes functions to plot the threshold independent ROC curves along with the associated AUC (area under the curve).
| Version: | 1.1.11 |
| Depends: | R (≥ 2.2.0) |
| Published: | 2023-01-07 |
| DOI: | 10.32614/CRAN.package.PresenceAbsence |
| Author: | Elizabeth Freeman |
| Maintainer: | Elizabeth Freeman <elizabeth.a.freeman at usda.gov> |
| License: | Unlimited |
| Copyright: | see file COPYRIGHTS |
| NeedsCompilation: | no |
| Citation: | PresenceAbsence citation info |
| Materials: | ChangeLog |
| CRAN checks: | PresenceAbsence results |
| Reference manual: | PresenceAbsence.pdf |
| Package source: | PresenceAbsence_1.1.11.tar.gz |
| Windows binaries: | r-devel: PresenceAbsence_1.1.11.zip, r-release: PresenceAbsence_1.1.11.zip, r-oldrel: PresenceAbsence_1.1.11.zip |
| macOS binaries: | r-release (arm64): PresenceAbsence_1.1.11.tgz, r-oldrel (arm64): PresenceAbsence_1.1.11.tgz, r-release (x86_64): PresenceAbsence_1.1.11.tgz, r-oldrel (x86_64): PresenceAbsence_1.1.11.tgz |
| Old sources: | PresenceAbsence archive |
| Reverse imports: | biomod2, ecospat, ModelMap |
| Reverse suggests: | BiodiversityR, ebirdst, spind |
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