This R package assists breeders in linking data systems with their analytic pipelines, a crucial step in digitizing breeding processes. It supports querying and retrieving phenotypic and genotypic data from systems like 'EBS' <https://ebs.excellenceinbreeding.org/>, 'BMS' <https://bmspro.io>, 'BreedBase' <https://breedbase.org>, and 'GIGWA' <https://github.com/SouthGreenPlatform/Gigwa2> (using 'BrAPI' <https://brapi.org> calls). Extra helper functions support environmental data sources, including 'TerraClimate' <https://www.climatologylab.org/terraclimate.html> and 'FAO' 'HWSDv2' <https://gaez.fao.org/pages/hwsd> soil database.
| Version: | 1.5.0 |
| Depends: | R (≥ 3.1.0) |
| Imports: | httr2, jsonlite, tcltk, utils, RNetCDF, stats, terra, RSQLite, DBI, future, future.apply |
| Suggests: | knitr, rmarkdown, remotes |
| Published: | 2024-09-18 |
| DOI: | 10.32614/CRAN.package.QBMS |
| Author: | Khaled Al-Shamaa [aut, cre], Mariano Omar Crimi [ctb], Zakaria Kehel [ctb], Johan Aparicio [ctb], ICARDA [cph] |
| Maintainer: | Khaled Al-Shamaa <k.el-shamaa at cgiar.org> |
| BugReports: | https://github.com/icarda-git/QBMS/issues |
| License: | GPL (≥ 3) |
| URL: | https://icarda-git.github.io/QBMS/ |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| In views: | Agriculture |
| CRAN checks: | QBMS results |
| Reference manual: | QBMS.pdf |
| Vignettes: |
BMS Example (source) BreedBase Example (source) EBS Example (source) GIGWA Example (source) FAO HWSD v2 Example (source) TerraClimate Example (source) |
| Package source: | QBMS_1.5.0.tar.gz |
| Windows binaries: | r-devel: QBMS_1.5.0.zip, r-release: QBMS_1.5.0.zip, r-oldrel: QBMS_1.5.0.zip |
| macOS binaries: | r-release (arm64): QBMS_1.5.0.tgz, r-oldrel (arm64): QBMS_1.5.0.tgz, r-release (x86_64): QBMS_1.5.0.tgz, r-oldrel (x86_64): QBMS_1.5.0.tgz |
| Old sources: | QBMS archive |
| Reverse imports: | qrlabelr |
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